The Northern Tanzanian Divergence in the East Africa Rift is arguably the best place on Earth to study the controls on rifting of thick lithosphere. Here, where the East Africa Rift intersects the Tanzanian Craton and the Mozambique Belt, the relationships between volcanism, faulting, pre-existing structures and lithospheric thickness and composition can be observed. In this work, we carry out the first lithospheric-scale 3D magnetotelluric modelling of the Northern Tanzanian Divergence and combine the results with experimental electrical conductivity and petrology models to calculate mantle composition, which is also inferred in the craton from reanalysis of garnet xenocryst data. Our results show that metasomatic materials exist in the cratonic lithospheric mantle and the relatively undeveloped southern part of the rift zone. However, the lithospheric mantle of the Mozambique Belt and the more developed northern section of the rift is more resistive and does not contain metasomatic phases. Combined with geochemical data from erupted lavas, these results suggest that, in zones that have experienced voluminous Cenozoic magmatism, melting events have destroyed the metasomes and dehydrated the mantle. Since the presence of magma is a primary control of lithospheric strength, rifting may become limited as the lithospheric mantle becomes dehydrated and harder to melt.