CONCLUSION
A total of 1,122,858 InDels were detected based on the whole genome
resequencing data of 46 Australian Boer goats and 81 local goats. Among
which, 11,229 candidate InDels with top 1% high signal were screened,
and 1,239 candidate genes were annotated. Gene enrichment experiment
identified important genes from muscle development, reproduction,
immunity, and metabolism. The results provide a theoretical basis for
the study of related genetic mechanisms in goats and valuable foundation
for molecular breeding in goats.