Title
Establishing A Comprehensive Workflow for Extracting
MS1 Isotope Distributions in LC-MS/MS Proteomics
Full names
Vilenne
Frédérique1, 2
Agten Annelies1
Dr. Appeltans Simon1
Dr. Ertaylan Gökhan2
Prof. Dr. Valkenborg
Dirk1
1: Data Science
Institute, Hasselt University, Diepenbeek, Belgium
2: Health, Flemish Institute for Technological
Research (VITO), Mol, Belgium
Name and title for contact
person
Vilenne Frédérique
Universiteit Hasselt – Campus Diepenbeek, Agoralaan Gebouw D, B-3590
Diepenbeek, Office E101
Frederique.vilenne@uhasselt.be
Abbreviations
DDA = Data Dependent Acquisition
DL = Deep Learning
ML = Machine Learning
ppm = parts per million
PSM = peptide spectral match
PRIDE = Proteomics Identifications Database
UPS = Universal Proteomics Standard
XIC = Extracted ion chromatograms
Keywords
Benchmark dataset
Deep learning
Machine learning
Mass Spectrometry
MS1
Total number of words
4.238 words in total