|
EYR |
EYR |
EYR |
YTH |
YTH |
YTH |
|
|
Standard |
Removing sex-linked loci |
|
Standard |
Removing sex-linked loci |
Filter |
# individuals |
# loci |
# loci |
# individuals |
# loci |
# loci |
No filtering |
782 |
53,324 |
53,324 |
641 |
118,732 |
118,732 |
Secondaries |
782 |
35,663 |
35,663 |
641 |
74,470 |
74,470 |
Sex-linked |
|
|
31,856 |
|
|
71,056 |
Excessively heterozygous |
|
|
31,832 |
|
|
71,038 |
Read depth |
782 |
21,577 |
19,531 |
641 |
53,179 |
50,783 |
Locus missing data |
782 |
13,972 |
12,899 |
641 |
16,481 |
15,813 |
Individual missing data |
753 |
13,925 |
12,853 |
628 |
16,421 |
15,771 |
Minor Allele Count |
753 |
13,693 |
12,626 |
628 |
14,908 |
14,246 |