Target endoparasites Primers ID Target region - gene Sequences Amplicon dimension References
Microsporidians (Nosema spp).
MSporF2 MSporDegR
16S - SSU
5’-AGTGGTGCATGGCCGTTTTC-3’ 5’-GGTGTGTRCAAAGAACAGGG -3’
270 bp
Mullins L J. et al., 2020
Trypanosomatids (Crithidia spp..)
CB-SSUrRNA-F2 CB18SR2
18S - SSU
5’-CTTTTGACGAACAACTGCCCTATC-3’ 5’-TGCTCCTTTGTTATCCCATGCT-3’
584 bp
Tripodi A. et al., 2018
Neogregarines (Apicystis bombi)
Apicyst357F Apicyst357R
region including part of 5.8S, ITS2 and 28S - SSU
5’-AGCGATGGATGTCTTGGGTC-3’ 5’-CCTAGTTAGTTTCTTTTCCTCCGC-3’
357 bp
Mullins L J. et al., 2020