Characteristic |
Ophiocordyceps xuefengensis |
Ophiocordyceps sinensis |
Cordyceps militaris |
Cordyceps
brongniartii |
Size (bp) |
78,744 |
157,559 |
33,277 |
33,926 |
A (%) |
36.08 |
36.70 |
36.98 |
36.51 |
T (%) |
33.98 |
33.10 |
36.23 |
36.15 |
G (%) |
16.33 |
15.70 |
15.20 |
15.13 |
C (%) |
13.61 |
13.70 |
11.59 |
12.21 |
Rate of GC (%) |
29.94 |
30.20 |
26.79 |
27.34 |
Rate of AT (%) |
70.06 |
69.80 |
73.21 |
72.66 |
AT-skew |
0.03 |
0.05 |
0.01 |
0.005 |
GC-skew |
0.09 |
0.09 |
0.14 |
0.11 |
PCGs (n) |
14 |
14 |
14 |
14 |
Introns (n) |
18 |
54 |
8 |
6 |
Intronic ORFs (n) |
16 |
45 |
8 |
5 |
GIY-YIG (n) |
4 |
10 |
4 |
4 |
LAGLIDADG (n) |
9 |
27 |
3 |
1 |
rRNAs (n) |
1 |
1 |
1 |
1 |
nRNAl (n) |
1 |
1 |
1 |
1 |
tRNAs (n) |
26 |
27 |
26 |
25 |
PCG regions (bp) |
34,994 |
104,257 |
17,735 |
18,329 |
Intronic
regions (bp)a
|
21,146 |
107,288 |
9,812 |
8,452 |
Exon regions (bp)b
|
13,848 |
13,287 |
12,978 |
13,098 |
tRNA genes (bp) |
1,934 |
2,010 |
1,924 |
1,867 |
rRNA genes (bp)c
|
7,225 |
7,144 |
4,666 |
4,801 |
Intergenic regions (bp) |
34,591 |
27,831 |
3,797 |
5,708 |