Note:
Summary of the results obtained with the Wilcoxon test or the redundancy
analysis (RDA) for all the genomic regions detected using genome scan
analyses. Information (name, corresponding scaffold and size) for each
region is given. For the two phenotypic traits investigated (DLA-R or
DLA-S), the haplotype (identified with individual sequencing data)
significantly correlated with the corresponding trait (i.e. the
advantageous haplotype) is indicated by a colored circle (blue =
Haplotype 1, green = Haplotype 2). Green ticks or red crosses indicate
which method was able to define the advantageous haplotype. The regions
in which haplotypes were identified as being significantly associated
with a higher diseased leaf area measured on the resistant cultivars are
written in blue, on the susceptible cultivar in green, and on both
cultivars in blue and green. DLA-R and DLA-S=Diseased Leaf Area measured
on the resistant (R) or the susceptible (S) cultivars.
Table 4 Architecture of host adaptation in P. fijiensispopulations