Transmission links M. bovis genomes SNP-distance Spoligotypes
Link 1 (deer) TB005S5L and TB004S4L 4 SB1401
Link 2 (deer) TB006S6L and TB007S7L 4 SB1401
Link 3 (deer) TB10S10L andTB0076S7L 10 SB1401
Link 4 (deer) TB004S4L and TB007S7L 8 SB1401
Link 5 (cattle) ERR4450971 and ERR4450970 11 SB1135
Link 6 (cattle) ERR4450970 and ERR4450974 11 SB1135
Link 7 (cattle) ERR4450974 and ERR4450972 8 SB1135
Link 8 (cattle) ERR4450974 and ERR4450973 11 SB1135
Link 9 (cattle) ERR4451184 and ERR4451185 3 SB095
Link 10 (cattle) ERR4450923 and ERR4450920 7 SB1369
Link 11 (cattle) ERR4450923 and ERR4450922 10 SB1369
Link 12 (cattle) ERR4450923 and ERR4450924 10 SB1369
Link 13 (cattle) ERR4450919 and ERR4450923 9 SB1369
Link 14 (cattle) ERR4450919 and ERR4450925 11 SB1369, SB0295
Link 15 (cattle) ERR4450932 and ERR4450928 10 SB0295
Link 16 (cattle) ERR4450934 and ERR4450927 7 SB0295
Link 17 (cattle) ERR4450932 and ERR4450926 11 SB0295
Link 18 (cattle) ERR4450932 and ERR4450929 8 SB0295
Link 19 (cattle) ERR4450929 and ERR4450930 7 SB0295, SB2709
Link 20 (cattle) ERR4450953 and ERR4450944 12 SB1993
Link 21 (cattle) ERR4450944 and ERR4450948 6 SB1993, SB2712
Link 22 (cattle) ERR4450944 and ERR4450949 5 SB1993
Link 23 (cattle) ERR4450955 and ERR4450941 6 SB0140
Link 24 (cattle) ERR4450941 and ERR4450940 6 SB0140
Link 25 (cattle) ERR4450955 and ERR4450954 7 SB0140
Link 26 (cattle) ERR4450938 and ERR4450937 12 SB1993
Link 27 (cattle) ERR4450962 and ERR4450950 9 SB1993, SB0121
Link 28 (cattle) ERR4450969 and ERR4450964 6 SB0121
Link 29 (cattle) ERR4450964 and ERR4450966 9 SB0121, SB1135
Link 30 (cattle) ERR4450969 and ERR4450968 7 SB0121
Link 31 (cattle) ERR4450969 and ERR4450965 9 SB0121
Link 32 (cattle) ERR4450965 and ERR4450961 11 SB0121