Table 2. DArT-derived SNP loci with sex-biased patterns of
heterozygosity for Macquarie perch (MP; 93 females and 78 males) and
golden perch (GP; 41 females and 25 males; see Supplementary Material S2
for more information). Old-X-linked loci- those homozygous in all males
but heterozygous in 10% or more females; loci bearing recent-Y-specific
polymorphism- homozygous in all females but heterozygous in 10% or more
males. For each DArT locus mapped to a reference genome, species
abbreviation, scaffold ID and coordinate are given. For all loci, count
of homozygous and heterozygous individuals in female (F) and male (M)
sample is given (see Supplementary Material S2 for details): F0 ref
hom/M0 ref hom = number of females/males homozygous for a reference
allele, F1 het/M1 het = number of females/males that are heterozygous,
F2 alt hom/M2 alt hom = number of females/males that are homozygous for
the alternative allele. MP scaffold 633 loci are in bold; the two GP
scaffold 203 loci are in bold italic. Asterisks indicate loci for which
heterozygotes were present in only one sex of a single population. Loci
are sorted by scaffold ID (four golden perch DArT-tags did not align to
the golden perch reference genome).