Macquarie perch golden perch
NCBI BioProjectID PRJNA516983 PRJNA556086
DNAseq:
Sample ID genome MP_SCH12 GOP001
BioSample DNAseq SAMN10817714 SAMN12340637
Illumina DNAseq data 237.1 Gb 264.5 Gb
NCBI-SRA accession DNAseq SRX7207073 SRX6595905
Nanopore 1D data 7.6 Gb 3.1 Gb
NCBI-SRA accession Nanopore SRX7207074 SRX6595904
Genome assembly:
Assembled genome size 675.98 Mb 661.43 Mb
Scaffold N50 845 Kb 252 Kb
Number of scaffolds 2,962 scaffolds 7,165 scaffolds
Contig N50 679 Kb 244 Kb
Number of contigs 3,369 contigs 7,352 contigs
GenBank assembly accession GCA_005408345.1 GCA_008360985.1
WGS Project accession SEMN01 VMKM01
Whole Genome Shotgun accession SEMN00000000.1 VMKM00000000.1
BUSCO3 genome completeness 96.9% 95.9%
Genome repetitiveness 27.7% 25.8%
RNAseq:
Sample ID RNAseq MP_527 GPTT01
BioSample RNAseq SAMN13380527 SAMN14943551
Illumina RNAseq, G bases 15.1 Gb 11.6 Gb
NCBI-SRA accession RNAseq SRX7207075 SRX8356284
Genome annotation:
Number of predicted protein-coding genes 33,422 36,108
Number of functionally annotated protein-coding genes 29,940 31,895
Number of genes with GO annotations 16,264 16,792
Zenodo DOI for annotations by RepeatModeler2, BRAKER2 and InterProScan5 10.5281/zenodo.4315338 10.5281/zenodo.4315338