Type Repeatmasker
(Repbase+Denovo) Repeatmasker
(Repbase+Denovo) TE protiens TE protiens Combined TEs
(all without TRF) Combined TEs
(all without TRF)
Length (bp) % in genome Length (bp) % in genome Length (bp) % in genome
DNA 88,177,866 10.20 7,698,813 0.89 94,695,859 10.95
LINE 205,758,594 23.80 90,240,215 10.44 235,904,361 27.29
SINE 134,806 0.02 0 0 134,806 0.02
LTR 142,449,802 16.48 15,507,775 1.79 147,540,995 17.07
Others 38 0.000004 0 0 38 0.000004
Unknown 7,689,177 0.89 0 0 7,689,177 3.42
Total 392,875,521 45.45 113,294,828 13.11 406,978,948 47.08