Figure 2: Minimum spanning tree of the genetic distance in the AS dataset. White arrows indicate one rosette of multiple multilocus genotypes differing from one allele of a central multilocus genotype, suspected to be recent mutants of a same multilocus lineage. Black arrow indicates a rosary pattern of multilocus genotypes differing from few alleles, suspected to be clones of a same multilocus lineage in which other sampled clones may have accumulated few mutations over generations.
Table1: An example of formatted triploid dataset ready to be analysed by GenAPoPop. Bold headers indicate the minimum required columns per individual; italic headers optional columns expected to format the minimum spanning tree of the genetic distances between individuals. One or multiple additional columns with custom information like ecological, physiological, traits, latitude and longitude, etc. can figure anywhere before the column containing the first allele of the first locus.